Citation: | Chengxu Li, Shiyan Xiao, Haojun Liang. Effects of Fluorescent Pair on the Kinetics of DNA Strand Displacement Reaction[J]. Chinese Journal of Chemical Physics . doi: 10.1063/1674-0068/cjcp2302015 |
[1] |
Y. J. Chen, N. Dalchau, N. Srinivas, A. Phillips, L. Cardelli, D. Soloveichik, and G. Seelig, Nat. Nanotechnol. 8, 755 (2013). doi: 10.1038/nnano.2013.189
|
[2] |
A. Phillips and L. Cardelli, J. R. Soc. Interface 6, S419 (2009). doi: 10.1098/rsif.2009.0072.focus
|
[3] |
L. Qian, E. Winfree, and J. Bruck, Nature 475, 368 (2011). doi: 10.1038/nature10262
|
[4] |
L. Qian and E. Winfree, Science 332, 1196 (2011). doi: 10.1126/science.1200520
|
[5] |
A. J. Thubagere, W. Li, R. F. Johnson, Z. Chen, S. Doroudi, Y. L. Lee, G. Izatt, S. Wittman, N. Srinivas, D. Woods, E. Winfree, and L. Qian, Science 357, eaan6558 (2017). doi: 10.1126/science.aan6558
|
[6] |
P. Wu, Y. Tu, Y. Qian, H. Zhang, and C. Cai, Chem. Commun. 50, 1012 (2014). doi: 10.1039/C3CC46773B
|
[7] |
A. Ono, S. Cao, H. Togashi, M. Tashiro, T. Fujimoto, T. Machinami, S. Oda, Y. Miyake, I. Okamoto, and Y. Tanaka, Chem. Commun. 39, 4825 (2008). doi: 10.1039/b808686a
|
[8] |
H. Yamaguchi, J. Šebera, J. Kondo, S. Oda, T. Komuro, T. Kawamura, T. Dairaku, Y. Kondo, I. Okamoto, A. Ono, J. V. Burda, C. Kojima, V. Sychrovský, and Y. Tanaka, Nucleic Acids Res. 42, 4094 (2014). doi: 10.1093/nar/gkt1344
|
[9] |
L. Tang, Y. Liu, M. M. Ali, D. K. Kang, W. Zhao, and J. Li, Anal. Chem. 84, 4711 (2012). doi: 10.1021/ac203274k
|
[10] |
D. Han, C. Wu, M. You, T. Zhang, S. Wan, T. Chen, L. Qiu, Z. Zheng, H. Liang, and W. Tan, Nat. Chem. 7, 835 (2015). doi: 10.1038/nchem.2325
|
[11] |
P. Q. Ma, Q. Huang, H. D. Li, B. C. Yin, and B. C. Ye, J. Am. Chem. Soc. 142, 3851 (2020). doi: 10.1021/jacs.9b11545
|
[12] |
B. Yurke, A. J. Turberfield, A. P. Mills, F. C. Simmel, and J. L. Neumann, Nature 406, 605 (2000). doi: 10.1038/35020524
|
[13] |
D. Y. Zhang and E. Winfree, J. Am. Chem. Soc. 131, 17303 (2009). doi: 10.1021/ja906987s
|
[14] |
D. Y. Zhang and G. Seelig, Nat. Chem. 3, 103 (2011). doi: 10.1038/nchem.957
|
[15] |
D. Scalise and R. Schulman, Annu. Rev. Biomed. Eng. 21, 469 (2019). doi: 10.1146/annurev-bioeng-060418-052357
|
[16] |
N. Srinivas, T. E. Ouldridge, P. Šulc, J. M. Schaeffer, B. Yurke, A. A. Louis, J. P. K. Doye, and E. Winfree, Nucleic Acids Res. 41, 10641 (2013). doi: 10.1093/nar/gkt801
|
[17] |
R. R. F. Machinek, T. E. Ouldridge, N. E. C. Haley, J. Bath, and A. J. Turberfield, Nat. Commun. 5, 5324 (2014). doi: 10.1038/ncomms6324
|
[18] |
P. Irmisch, T. E. Ouldridge, and R. Seidel, J. Am. Chem. Soc. 142, 11451 (2020). doi: 10.1021/jacs.0c03105
|
[19] |
N. E. C. Haley, T. E. Ouldridge, I. Mullor Ruiz, A. Geraldini, A. A. Louis, J. Bath, and A. J. Turberfield, Nat. Commun. 11, 2562 (2020). doi: 10.1038/s41467-020-16353-y
|
[20] |
A. J. Genot, D. Y. Zhang, J. Bath, and A. J. Turberfield, J. Am. Chem. Soc. 133, 2177 (2011). doi: 10.1021/ja1073239
|
[21] |
Q. Li, G. Luan, Q. Guo, and J. Liang, Nucleic Acids Res. 30, e5 (2002). doi: 10.1093/nar/30.2.e5
|
[22] |
S. Tyagi, D. P. Bratu, and F. R. Kramer, Nat. Biotechnol. 16, 49 (1998). doi: 10.1038/nbt0198-49
|
[23] |
X. Sun, B. Wei, Y. Guo, S. Xiao, X. Li, D. Yao, X. Yin, S. Liu, and H. Liang, J. Am. Chem. Soc. 140, 9979 (2018). doi: 10.1021/jacs.8b05203
|
[24] |
R. A. Cardullo, S. Agrawal, C. Flores, P. C. Zamecnik, and D. E. Wolf, Proc. Natl. Acad. Sci. USA 85, 8790 (1988). doi: 10.1073/pnas.85.23.8790
|
[25] |
L. E. Morrison and L. M. Stols, Biochem. 32, 3095 (1993). doi: 10.1021/bi00063a022
|
[26] |
B. G. Moreira, Y. You, M. A. Behlke, and R. Owczarzy, Biochem. Biophys. Res. Commun. 327, 473 (2005). doi: 10.1016/j.bbrc.2004.12.035
|
[27] |
S. A. E. Marras, F. R. Kramer, and S. Tyagi, Nucleic Acids Res. 30, e122 (2002). doi: 10.1093/nar/gnf121
|
[28] |
C. Li, Z. Li, W. Han, X. Yin, X. Liu, S. Xiao, and H. Liang, Chem. Commun. 58, 5849 (2022). doi: 10.1039/D2CC01072K
|
[29] |
J. N. Zadeh, C. D. Steenberg, J. S. Bois, B. R. Wolfe, M. B. Pierce, A. R. Khan, R. M. Dirks, and N. A. Pierce, J. Comput. Chem. 32, 170 (2011). doi: 10.1002/jcc.21596
|
[30] |
J. D. Puglisi and I. Tinoco Jr., Method Enzymol. 180, 304 (1989). doi: 10.1016/0076-6879(89)80108-9
|
[31] |
L. A. Marky and K. J. Breslauer, Biopolymers 26, 1601 (1987). doi: 10.1002/bip.360260911
|
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